[Project title] =TPMAT
[CEL directory] =/data1/hji/projects/tileprobe_project/mouseprom/ALLCEL/
[BPMAP directory] =/data1/hji/projects/tileprobe_project/mouseprom/
[GenomeGrp] =Mm
[Include Probes not in GenomeGrp] = 0
[Working directory] =/data1/hji/projects/tileprobe_project/mouseprom/TPMAT_OBPMAP/
[No. of Libraries] = 1
[Libraries]
Mm_PromPR_v02-1_NCBIv36.NR.bpmap
[No. of Samples] = 109
[Arrays]
>1
060504_ChIP_GliAct_EB.CEL
>2
060504_Input_EB.CEL
>3
060516_ChIP_Gli3T_5_10.CEL
>4
060516_ChIP_Gli3T_5_8.CEL
>5
060516_Input_Gli3T_5_11.CEL
>6
060516_Input_Gli3T_5_8.CEL
>7
060605_ChIP_Gli1_4_10.CEL
>8
060605_ChIP_Gli1_4_11.CEL
>9
060605_ChIP_Gli1_5_22.CEL
>10
060605_Input_Gli1_4_10.CEL
>11
060605_Input_Gli1_4_11.CEL
>12
060605_Input_Gli1_5_22.CEL
>13
060926_ChIP_Ant_Input.CEL
>14
060926_ChIP_Ant_K27.CEL
>15
060926_ChIP_Ant_K4.CEL
>16
060926_ChIP_Ant_PanH3.CEL
>17
060926_ChIP_Post_Input.CEL
>18
060926_ChIP_Post_K27.CEL
>19
060926_ChIP_Post_K4.CEL
>20
060926_ChIP_Post_PanH3.CEL
>21
061006_ChIP_Ant_Input.CEL
>22
061006_ChIP_Ant_K27.CEL
>23
061006_ChIP_Ant_K4.CEL
>24
061006_ChIP_Ant_PanH3.CEL
>25
061006_ChIP_Post_Input.CEL
>26
061006_ChIP_Post_K27.CEL
>27
061006_ChIP_Post_K4.CEL
>28
061006_ChIP_Post_PanH3.CEL
>29
3meH3K27_1.CEL
>30
3meH3K27_2.CEL
>31
3meH3K27_3.CEL
>32
3meH3K4_1.CEL
>33
3meH3K4_2.CEL
>34
3meH3K4_3.CEL
>35
abMyc_1.CEL
>36
abMyc_2.CEL
>37
abMyc_3.CEL
>38
abNanog_1.CEL
>39
abNanog_2.CEL
>40
abNanog_3.CEL
>41
bDax1_1.CEL
>42
bDax1_2.CEL
>43
bDax1_3.CEL
>44
bDax1_4.CEL
>45
BirA_1.CEL
>46
BirA_2.CEL
>47
BirA_3.CEL
>48
BirA_4.CEL
>49
bKlf4_1.CEL
>50
bKlf4_2.CEL
>51
bKlf4_3.CEL
>52
bKlf4_4.CEL
>53
bKlf4_5.CEL
>54
bKlf4_6.CEL
>55
bKlf4_7.CEL
>56
bKlf4_8.CEL
>57
bMyc_1.CEL
>58
bMyc_2.CEL
>59
bMyc_3.CEL
>60
bNac1_1.CEL
>61
bNac1_2.CEL
>62
bNac1_3.CEL
>63
bNanog_1.CEL
>64
bNanog_2.CEL
>65
bNanog_3.CEL
>66
bOct4_1.CEL
>67
bOct4_2.CEL
>68
bOct4_3.CEL
>69
bRex1_1.CEL
>70
bRex1_2.CEL
>71
bRex1_3.CEL
>72
bRex1_4.CEL
>73
bRex1_5.CEL
>74
bRex1_6.CEL
>75
bSox2_1.CEL
>76
bSox2_2.CEL
>77
bSox2_3.CEL
>78
bSox2_4.CEL
>79
bSox2_5.CEL
>80
bZfp281_1.CEL
>81
bZfp281_2.CEL
>82
bZfp281_3.CEL
>83
Input_BirAJ1_1.CEL
>84
Input_BirAJ1_2.CEL
>85
Input_BirAJ1_3.CEL
>86
Input_BirAJ1_4.CEL
>87
Input_J1_1.CEL
>88
Input_J1_2.CEL
>89
Input_J1_3.CEL
>90
GSM291520_SRFChIP_Input.CEL
>91
GSM291521_SRFChIP_IP.CEL
>92
GSM310416_preB_1_MmProm.CEL
>93
GSM310416_preB_2_MmProm.CEL
>94
GSM310416_preB_3_MmProm.CEL
>95
GSM310417_MLLAF4_1_MmProm.CEL
>96
GSM310417_MLLAF4_2_MmProm.CEL
>97
GSM310417_MLLAF4_3_MmProm.CEL
>98
GSM310418_MLLAF4-224_MmProm.CEL
>99
GSM310418_MLLAF4-226_MmProm.CEL
>100
GSM310418_MLLAF4-227_MmProm.CEL
>101
GSM310418_MLLAF4-228_MmProm.CEL
>102
GSM310418_MLLAF4-654_MmProm.CEL
>103
GSM310418_MLLAF4-992_MmProm.CEL
>104
GSM228764_IgG_1.CEL
>105
GSM228764_IgG_2.CEL
>106
GSM228764_IgG_3.CEL
>107
GSM228764_PU.1_1.CEL
>108
GSM228764_PU.1_2.CEL
>109
GSM228764_PU.1_3.CEL
[Remove masked cells in the CEL files] (1:yes; 0:no) = 0
[Remove outlier cells in the CEL files] (1:yes; 0:no) = 0