Hongkai’s Research Group

People

HONGKAI JI, Ph.D. [CV]

Professor, Department of Biostatistics

Johns Hopkins Bloomberg School of Public Health

615 North Wolfe Street, Room E3638, Baltimore, MD 21205, USA

Phone: (410) 955-3517

Fax: (410) 955-0958

Email: hji@jhu.edu

Current GROUP members

Weiqiang Zhou, Ph.D.

Assistant Scientist, Department of Biostatistics

 

FORMER GROUP MEMBERS & VISITING SCHOLARS

Zhicheng Ji, PhD Candidate

(Biostatistics)

Weixiang Fang, PhD Candidate

(Biostatistics)

Runzhe Li, PhD Candidate

(Biostatistics)

 

Boyang Zhang, PhD Candidate

(Biostatistics)

Yueyi (Kate) Li, ScM Candidate

(Biostatistics)

Wenpin Hou, Ph.D.

Postdoctoral Fellow

(Biostatistics, co-mentored by Dr. Stephanie Hicks)

Name

Position

Year

Other Advisors

Projects Involved

Current Position

Xuekui Zhang

Postdoc

2013

 

Time course ChIP-seq

Assistant Professor, University of Victoria

Fang Du

Postdoc

2014

 

BDVD, BigClust

Data Scientist, Covance

Ben Sherwood

Postdoc

2015

 

Big data prediction

Assistant Professor, University of Kansas

Hao Wu 

PhD

2010

Rafael Irizarry

JAMIE, PolyaPeak

Associate Professor, Emory University

Yang Ning

PhD

2012

Kung-Yee Liang

dPCA

Assistant Professor, Cornell University

George Wu

PhD

2013

 

ChIP-PED, ChIPXpress

Crescendo Bioscience

Yingying Wei

PhD

2014

 

iASeq, CorMotif

Assistant Professor, Chinese University of Hong Kong

Bing He

PhD

2017

 

FCAT

Data Scientist, Vatic Labs

Dan Jiang

PhD

2017

 

Permutation adjustment

Data Scientist, Drawbridge

Chen Li

MHS

2011

 

hmChIP

Assistant Professor, Auburn University

Jiehuan Sun

ScM

2012

 

GEO annotation

PhD student, Yale University

Cheng Ran (Lisa) Huang

MHS

2012

PhD in Mol. Biol. & Genetics with Jef Boeke

LisaMap

L.E.K. Consulting

Zheng Kuang

MHS

2014

PhD in Mol. Biol. & Genetics with Jef Boeke

Time course ChIP-seq

Postdoc, New York University

Shilu Zhang

ScM

2014

 

Motif, CpG Island

PhD student, Univ. of Wisconsin, Madison

Yun Qing

MHS

2015

PhD in Mol. Biol. & Genetics with Duojia Pan

ChIP-seq

MD Anderson Cancer Center

Ding Ding

ScM

2017

 

Spanning trees

Research fellow, Johns Hopkins School of Medicine

Yifan Zhou

ScM

2017

 

HiC

PhD student, George Washington University

Gege Gui

ScM

2018

 

ALS, ChIRP

Research associate, NIH/NHLBI

Chang (April) Shu

MHS

2018

PhD in Mental Health

EWAS

Postdoc, Yale University

Luqin Gan

ScM

2019

 

Semi-supervised learning

PhD student, Rice University

Jennifer Toolan Judy

Worked on Project

2009

 

 

PhD, Johns Hopkins University

Fang Han

Worked on Project

2011

 

 

Assistant Professor, University of Washington

Luolan Li

Visiting Student

2012

 

 

PhD student, University of British Columbia

Ashwini Patil

Worked on Project

2013

 

 

MS student, Johns Hopkins University

Jiawei Bai

Worked on Project

2014

 

 

Assistant Scientist, Johns Hopkins University

Hongqiang Lyu

Visiting Scholar

2018

 

HiC

Xi’an Jiaotong University

Weiqing Huang

Visiting Student

2019

 

Prediction & functional interpretation of genetic variants 

Tsinghua University