Publications

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• Scharpf RB, Parmigiani G, Pevsner J, and Ruczinski I (2008). Hidden Markov Models for the Assessment of Chromosomal Alterations using High-throughput SNP arrays. Annals of Applied Statistics, to appear.

• Scharpf RB, Ting JC, Pevsner J, and Ruczinski I (2007). SNPchip: R classes and methods for SNP array data Bioinformatics, doi:10.1093/bioinformatics/btl638.

• Scharpf RB, Iacobuzio-Donahue C, Sneddon JB, Parmigiani G (2006). When should one subtract background fluorescence in two color microarrays? Biostatistics 2006, doi: 10.1093/biostatistics/kxl041.

• Morrell CN, Matsushita K, Chiles K, Scharpf RB , Yamakuchi M, Mason RJ, Bergmeier W, Mankowski JL, Baldwin WM 3rd, Faraday N, Lowenstein CJ (2004). Regulation of platelet granule exocytosis by S-nitrosylation. Proceedings of the National Academy of Sciences, 102:3782-7.

• Faraday N, Martinez EA, Scharpf RB , Kasch-Semenza L, Dorman T, Pronovost PJ, Perler B, Gerstenblith G, Bray PF, Fleisher LA (2004). Platelet gene polymorphisms and cardiac risk assessment in vascular surgical patients. [ PubMed ] Anesthesiology, 101(6):1291-7.

• Scharpf R , Garrett ES, Hu J, Parmigiani G (2003). Statistical Modeling and Visualization of Molecular Profiles in Cancer. BioTechniques, 34 Supplement:S22-S29.

• Faraday N, Guallar E, Sera VA, Bolton ED, Scharpf RB , Cartarius AM, Emery K, Concord J, Kickler TS (2002). Utility of whole blood hemostatometry using the clot signature analyzer for assessment of hemostasis in cardiac surgery. [ PubMed ] Anesthesiology, 96(5):1115-22.

• Faraday N, Scharpf RB , Dodd-o JM, Martinez EA, Rosenfeld BA, Dorman T (2001). Leukocytes can enhance platelet-mediated aggregation and thromboxane release via interaction of P-selectin glycoprotein ligand 1 with P-selectin. [ PubMed ] Anesthesiology, 94(1):145-51.

• Anagnostopoulos A, Scharpf RB 1998. It's a knockout! Trends in Genetics, 14(2):82.

• Anagnostopoulos A, Scharpf RB 1998. It's a knockout! Trends in Genetics, 13(12):499-500.

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