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Download |
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Download CisGenomev1.2 (Older versions: v1.1, v1) |
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CisGenome Windows (GUI, Browser and Core Programs All incluced) |
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Download CisGenomev1.2 (Older versions: v1.1, v1) |
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CisGenome Mac OS (Core Programs Only) |
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Download CisGenome v1.2 (Older versions: v1.1, v1) |
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CisGenome Linux (Core Programs Only) |
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Human: hg19 (NOTE: no phastCons conservation score available at this time for hg19) Mouse: mm9, mm8 (Windows Self Extractable), mm8 Dog: canFam2 Cow: bosTau4 Chicken: galGal3 Zebrafish: danRer5 (NOTE: no phastCons conservation score available at this time) Fly (D. melanogaster): dm3 Worm (C. elegans): ce6 Yeast (S. cerevisiae): sacCer1 TAIR7 (NOTE: Bugs may exist in TAIR7. Using TAIR8 or TAIR9 for analysis is recommended). |
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Genome Database |
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HUMAN Human Genome Tiling 1.0R (14 array set): hg19, hg18 Human Genome Tiling 2.0R (7 array set): hg19, hg18 Human Promoter 1.0R: hg19, hg18
MOUSE Mouse Genome Tiling 2.0R (7 array set): mm9, mm8
FLY (D. melanogaster) Drosophila Tiling 1.0R: dm3 Drosophila Tiling 2.0R: dm3
Worm (C. elegans) C. elegans Tiling 1.0R: ce6
YEAST (S. cerevisiae) S. cerevisiae Tiling 1.0R: sacCer1
ARABIDOPSIS Arabidopsis Tiling 1.0R: TAIR9, TAIR8, TAIR7
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Affymetrix Tiling Array Library Files (BPMAP files)
(Note: To be fully consistent with CisGenome infrastructure, using BPMAP files downloaded from this website is recommended.) |
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DATA |
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SOFTWARE (source code and executables) |
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NRSF ChIP-seq Data (from Johnson et al., Science, 316:1497-1502, 2007, Human hg17) STAT1 ChIP-seq Data (from Robertson et al., Nature Methods, 4:651-657, 2007, Human hg18): stimulated, unstimulated |
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Sample Data |