Home > Abstract


We have developed a tool set which allows for hairpin sequences to be aligned against a database of sequences, and then for these results to be viewed graphically.  The tool set consists of five Perl scripts which run the BLAST alignment and process the reports, and three R scripts which accept the processed data and create multiplicity graphs and an alignment viewgraph.  These graphs allow us to examine the interactions between non-codingRNAs (ncRNAs) and protein coding genes in Plasmodium falciparum, and give insight into the functional make-up of the intergenic regions.

Powered By CMSimple