Simina Maria Boca Department of Biostatistics · Bloomberg School of Public Health · Johns Hopkins University
Center for Computational Genomics

  Welcome | Curriculum vitae | Software | Course schedule | Teaching | Resources | Contact |

R packages
[PatientGeneSets] by Simina M. Boca and Giovanni Parmigiani. (In Bioconductor 2.8. Install the RSQLite package first.)
Functions and data structures for patient-oriented gene-set analysis methods for cancer mutation data.

[CancerMutationAnalysis - .tar.gz version for Linux] by Giovanni Parmigiani, Simina M. Boca, and Jimmy Lin.
Functions and data structures for the analysis of cancer mutation data.