Constantine Frangakis
Department of Biostatistics
Bloomberg School of Public Health
Johns Hopkins University

An, MW, Frangakis, CE, Musick, BS, and Yiannoutsos, CT. (2008). The need for doublesampling designs in survival studies: an application to monitor PEPFAR. Biometrics (to appear).

Frangakis, CE, Rubin, DB, An,MW, MacKenzie, E. (2007). Principal stratification designs to estimate input data missing due to death. Biometrics, (with discussion) 63, 641–662.

Baker, SG, Frangakis, CE, and Lindeman KS. (2007). Estimating efficacy in a proposed randomized trial with initial and later noncompliance. Journal and the Royal Statistical Society, Series C 56 2, 211-221.

Segal JB, Griswold M, Achy-Brou A, Herbert R, Bass EB, Dy SM, Millman AE, Wu AW, Frangakis CE. (2007). Using Propensity Scores Subclassification to Estimate Effects of Longitudinal Treatments: An Example Using a New Diabetes Medication. Medical Care 10, S149–S154.

Roland C, Varadhan R, and Frangakis CE (2007). Squared polynomial extrapolation methods with cycling: an application to the positron emission tomography problem. Numerical Algorithms 44, 159–172.

Frangakis, CE and Wu, H. (2007). The geometry of inadmissibility of independent observations for estimating a single parameter in two-parameter ordered symmetric problems. Metron 65.

Huang IC, Frangakis, CE, Atkinson, MJ, Willke, RJ, Leite, WL, Vogel, WB, and Wu, AW (2008). Addressing Ceiling Effects in Health Status Measures: A Comparison of Techniques Applied to Measures for People with HIV Disease. Health Services Research 43, 327–339.

Huang IC, Willke, RJ, Atkinson, MJ, Lenderking, WR, Frangakis, C and Wu, AW (2007). US and UK versions of the EQ-5D preference weights: Does choice of preference weights make a difference? Quality of Life Research 16, 1065–1072.

Terzidis A, Koutroumpa A, Skalkidis I, Matzavakis I, Malliori M, Frangakis CE, DiScala C, Petridou ET. (2007). Water safety: age-specific changes in knowledge and attitudes following a school-based intervention. Injury Prevention 13, 120-124.

Farmakakis T, Dessypris N, Alexe DM, Frangakis C, Petoussis G, Malliori M, Petridou TE. (2007). Magnitude and object-specific hazards of aspiration and ingestion injuries among children in Greece. Int J Pediatr Otorhinolaryngol. 71, 317-24

Georgiades, CS, Liapi, E, Frangakis, CE, Park, J, Kim, HW, Hong, K, and Geschwind, JFH (2006). Prognostic accuracy of 12 liver staging systems in patients with unresectable hepatocellular carcinoma treated with transarterial chemoembolization. J Vasc Interv Radiol 17, 1619–1624 (with discussion on method in 18, 455–456).

Martin, BK, Frangakis, CE, Rosenberg, PB, et al. (2006). Design of Depression in Alzheimer’s Disease Study-2. American Journal of Geriatric Psychiatry 14, 920–930.

Li, F and Frangakis, CE (2006). Polydesigns in causal inference. Biometrics 62, 343–351.

Frangakis, CE (2006). Discussion of article by A Forcina on “Causal effects in the presence of non-compliance: a latent variables approach”. Metron 64.

Dassopoulos, T, Frangakis, CE, Cruz-Correa, M, Talor, MV, Burek, CL, Nouvet, F, Bayless, TM, Brant, SR. (2006). Antibodies to Saccharomyces cerevisiae in Crohn’s disease: Higher titers are associated with a greater frequency of mutant NOD2/CARD15 alleles and with a higher probability of complicated disease. Inflammatory Bowel Diseases 13, 143–151.

Vlahos, NF, Lipari, C, Bankowski, B, Lai, TH, King, J, Shi, IM, Fragakis, K, and Zhao, Y. (2006). The effect of luteal phase support on endometrial L-Selectin ligand expression following ovarian stimulation with recFSH and Ganirelix Acetate. J Clin Endocrinol Metab 91, 4043–4049.

Doan, BQ, Frangakis, CE, Shugart, YY, and Bailey-Wilson, JE. (2006). Application of the propensity score in a covariate-based linkage analysis of the collaborative study on the genetics of alcoholism. BMC Genetics 6, S33.

Go, V, Frangakis, CE, Van Nam, L, Bergenstrom, A, Sripaipan, T, Zenilman, JM, Celentano, DC, Minh Quan, V. (2006). High HIV sexual risk behaviors and STD prevalence among IDUs in northern Vietnam: implications for a generalized HIV epidemic. Journal of Acquired Immune Deficiency Syndromes 42, 108–115.

Doan, BQ, Sorant, AJM, Frangakis, CE, Bailey-Wilson, JE, Shugart, YY. (2006) Covariatebased linkage analysis: Application of a propensity score as the single covariate consistently improves power to detect linkage. European Journal of Human Genetics 14, 1018–1026.

Huang, IC, Frangakis, CE, and Wu, AW. (2006). The relationship of excess body weight and health-related quality of life (HRQOL): evidence from a population study in Taiwan. International Journal of Obesity 30, 1250–1259.

Huang, IC,Wu, AW, and Frangakis, CE. (2006). Do the SF-36 and WHOQOL-BREF measure the same constructs ? Evidence from the Taiwan population. Quality of Life Research 15, 15–24.

Li, F and Frangakis, CE (2005). Designs for partially controlled studies: messages from a review. Statistical Methods in Medical Research 14, 417–431.

Papadopoulos, FC, Frangakis, CE, Skalkidou, A, Petridou, E, Stevens, RG, Trichopoulos, D. (2005). Exploring lag and duration effect of sunshine in triggering suicide. Journal of Affective Disorders 88 287–297.

Mock, V, Frangakis, CE, et al. (2005). Exercise manages fatigue during breast cancer treatment: A randomized controlled trial. Psycho-oncology 14, 464–477.

Matzavakis, I, Frangakis, CE, Charalampopoulo A, Petridou E. (2005). Burn injuries related to motorcycle exhaust pipes: a study in Greece. Burns 31, 372–374.

Huang, IC, Frangakis, CE, Dominici, F, Diette, GB, Wu, AW. (2005). Application of a propensity score approach for risk adjustment in profiling multiple physician groups on asthma care. Health Services Research 40, 253–278. [software]

Huang , IC, Dominici , F, Frangakis, CE, Diette, G, Damberg, CL, and Wu, AW (2005). Is risk-adjustor selection more important than statistical approach for provider profiling? Asthma as an example. Medical Decision Making 25, 20–34.

Huang IC, Diette GB, Dominici F, Frangakis CE, Wu AW. (2005). Variations of physician group profiling indicators for asthma care. American Journal of Managed Care 11, 38–44.

Frangakis, CE, Brookmeyer, RS, Varadhan, R, Mahboobeh, S, Vlahov, D, and Strathdee, SA. (2004). Methodology for evaluating a partially controlled longitudinal treatment using principal stratification, with application to a Needle Exchange Program. Journal of the American Statistical Association 99 239–249. [software]

Frangakis, CE and Varadhan, R. (2004). Systematizing the evaluation of partially controlled studies using principal stratification: from theory to practice. Statistica Sinica 14, 945–947.

Varadhan, R, and Frangakis, CE (2004). Revealing and addressing length-bias and heterogeneous effects in frequency case-crossover studies. American Journal of Epidemiology 159, 596–602.

Petridou E, Dessypris N, Frangakis, CE, Belechri M, Mavrou A, Trichopoulos D. (2004). Estimating the population burden of injuries: a comparison of household surveys and Emergency Department surveillance. Epidemiology 15, 428–432.

Papadopoulos CF, Petridou E, Frangakis CE, Farmakakis T, Moller H, Rider G (2004). Switching to Euro: still hard to swallow? Archives of Diseases in Childhood (with editorial) 89, 382–383.

Barnard, J, Frangakis*, CE, Hill*, JL, and Rubin, DB (2003). A Principal Stratification approach to broken randomized experiments: a case study of School Choice vouchers in New York City. (*Co-corresponding authors). Journal of the American Statistical Association (with discussion) 98, 299-323.

Lyketsos, CG, DelCampo, L, Steinberg, M, Miles, Q, Steele, RN, Munro, C, Baker AS, Sheppard, JME, Frangakis, CE, Brandt J, and Rabins, PV. (2003). Treating depression in Alzheimer’s disease: Efficacy and safety of sertraline, and the benefits of depression reduction. Archives of General Psychiatry 60, 736–746.

Frangakis, CE, Rubin, DB, and Zhou, XH. (2002). Clustered encouragement design with individual noncompliance: Bayesian inference and application to Advance Directive Forms. Biostatistics (with discussion) 3, 147–164.

Frangakis, CE, and Rubin, DB (2002). Principal stratification in causal inference. Biometrics 58, 21–29. [software: README, Code]

Frangakis, CE, and Varadhan, R (2002). Confidence intervals for seasonal risk, with null values on the boundary. Epidemiology 13, 734–737. [software]

Petridou, E, Papadopoulos, FC, Frangakis, CE, Skalkidou, A, and Trichopoulos, D. (2002). A role of sunshine in the triggering of suicide. Epidemiology 13, 106–109 (with discussion 492-494).

Frangakis, CE, and Baker, SG (2001). Compliance sub-sampling designs for comparative research: estimation and optimal planning. Biometrics 57, 899–908.

Frangakis, CE, and Rubin, DB (2001). Addressing the idiosyncrasy in estimating survival curves using double-sampling in the presence of self-selected right censoring. Biometrics (with discussion) 57, 333–353.

Rubin, DB, and Frangakis, CE (1999). Comment on “Estimation of the causal effect of a time-varying exposure on the marginal mean of a repeated binary outcome” by JM Robins, S Greenland, and FC Hu. Journal of the American Statistical Association 94, 702–704.

Frangakis, CE, and Rubin, DB (1999). Addressing complications of intention-to-treat analysis in the presence of all-or-none treatment-noncompliance and subsequent missing outcomes. Biometrika 86, 365–379.

Petridou, E, Zavitsanos, X, Dessypris, N, Frangakis, CE, Mandyla, M, Doxiadis, S, and Trichopoulos, D (1997). Adolescents in high-risk trajectory: clustering of risky behavior and the origins of socioeconomic health differentials. Preventive Medicine 26, 215–219.

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